From: Michael R. Crusoe <crusoe@debian.org>
Subject: fix typos
Forwarded: https://github.com/vcflib/vcflib/pull/308
--- libvcflib.orig/doc/popStats.md
+++ libvcflib/doc/popStats.md
@@ -21,7 +21,7 @@
 
 
 
-  Calculates basic population statistics at bi-allelic sites. The allele frequency is the number of non-reference alleles divided by the total number of alleles.  The expected hetrozygosity is 2*p*q, where p is the non-reference allele frequency and q is 1-p.  The observed heterozgosity is the fraction of 0/1 genotypes out of all genotypes.  The inbreeding coefficent, Fis, is the relative heterozygosity of each individual vs. compared to the target group. 
+  Calculates basic population statistics at bi-allelic sites. The allele frequency is the number of non-reference alleles divided by the total number of alleles.  The expected hetrozygosity is 2*p*q, where p is the non-reference allele frequency and q is 1-p.  The observed heterozgosity is the fraction of 0/1 genotypes out of all genotypes.  The inbreeding coefficient, Fis, is the relative heterozygosity of each individual vs. compared to the target group. 
 
 Output : 9 columns :                 
      1. seqid                        
--- libvcflib.orig/man/popStats.1
+++ libvcflib/man/popStats.1
@@ -18,7 +18,7 @@
 
 
 
-  Calculates basic population statistics at bi-allelic sites. The allele frequency is the number of non-reference alleles divided by the total number of alleles.  The expected hetrozygosity is 2*p*q, where p is the non-reference allele frequency and q is 1-p.  The observed heterozgosity is the fraction of 0/1 genotypes out of all genotypes.  The inbreeding coefficent, Fis, is the relative heterozygosity of each individual vs. compared to the target group. 
+  Calculates basic population statistics at bi-allelic sites. The allele frequency is the number of non-reference alleles divided by the total number of alleles.  The expected hetrozygosity is 2*p*q, where p is the non-reference allele frequency and q is 1-p.  The observed heterozgosity is the fraction of 0/1 genotypes out of all genotypes.  The inbreeding coefficient, Fis, is the relative heterozygosity of each individual vs. compared to the target group. 
 
 Output : 9 columns :                 
      1. seqid                        
--- libvcflib.orig/src/popStats.cpp
+++ libvcflib/src/popStats.cpp
@@ -36,7 +36,7 @@
   cerr << "      General population genetic statistics for each SNP                                                                    " << endl << endl;
 
   cerr << R"(
-  Calculates basic population statistics at bi-allelic sites. The allele frequency is the number of non-reference alleles divided by the total number of alleles.  The expected hetrozygosity is 2*p*q, where p is the non-reference allele frequency and q is 1-p.  The observed heterozgosity is the fraction of 0/1 genotypes out of all genotypes.  The inbreeding coefficent, Fis, is the relative heterozygosity of each individual vs. compared to the target group. )" << endl << endl;
+  Calculates basic population statistics at bi-allelic sites. The allele frequency is the number of non-reference alleles divided by the total number of alleles.  The expected hetrozygosity is 2*p*q, where p is the non-reference allele frequency and q is 1-p.  The observed heterozgosity is the fraction of 0/1 genotypes out of all genotypes.  The inbreeding coefficient, Fis, is the relative heterozygosity of each individual vs. compared to the target group. )" << endl << endl;
 
   cerr << "Output : 9 columns :                 "    << endl;
   cerr << "     1. seqid                        "    << endl;
--- libvcflib.orig/README.md
+++ libvcflib/README.md
@@ -117,7 +117,7 @@
 
 | filter command | description |
 | :-------------- | :---------- |
- | [vcfuniq](./doc/vcfuniq.md) | List unique genotypes. Like GNU uniq, but for VCF records. Remove records which have the same positon, ref, and alt as the previous record. |
+ | [vcfuniq](./doc/vcfuniq.md) | List unique genotypes. Like GNU uniq, but for VCF records. Remove records which have the same position, ref, and alt as the previous record. |
  | [vcfuniqalleles](./doc/vcfuniqalleles.md) | List unique alleles For each record, remove any duplicate alternate alleles that may have resulted from merging separate VCF files. |
  | [vcffilter](./doc/vcffilter.md) | VCF filter the specified vcf file using the set of filters |
 
--- libvcflib.orig/doc/vcflib.md
+++ libvcflib/doc/vcflib.md
@@ -37,7 +37,7 @@
 
 | filter command | description |
 | :-------------- | :---------- |
- | [vcfuniq](./vcfuniq.md) | List unique genotypes. Like GNU uniq, but for VCF records. Remove records which have the same positon, ref, and alt as the previous record. |
+ | [vcfuniq](./vcfuniq.md) | List unique genotypes. Like GNU uniq, but for VCF records. Remove records which have the same position, ref, and alt as the previous record. |
  | [vcfuniqalleles](./vcfuniqalleles.md) | List unique alleles For each record, remove any duplicate alternate alleles that may have resulted from merging separate VCF files. |
  | [vcffilter](./vcffilter.md) | VCF filter the specified vcf file using the set of filters |
 
--- libvcflib.orig/doc/vcfuniq.md
+++ libvcflib/doc/vcfuniq.md
@@ -11,7 +11,7 @@
 
 # DESCRIPTION
 
-List unique genotypes. Like GNU uniq, but for VCF records. Remove records which have the same positon, ref, and alt as the previous record.
+List unique genotypes. Like GNU uniq, but for VCF records. Remove records which have the same position, ref, and alt as the previous record.
 
 
 
--- libvcflib.orig/man/vcflib.1
+++ libvcflib/man/vcflib.1
@@ -48,7 +48,7 @@
 T}@T{
 List unique genotypes.
 Like GNU uniq, but for VCF records.
-Remove records which have the same positon, ref, and alt as the previous
+Remove records which have the same position, ref, and alt as the previous
 record.
 T}
 T{
--- libvcflib.orig/man/vcfuniq.1
+++ libvcflib/man/vcfuniq.1
@@ -12,7 +12,7 @@
 .PP
 List unique genotypes.
 Like GNU uniq, but for VCF records.
-Remove records which have the same positon, ref, and alt as the previous
+Remove records which have the same position, ref, and alt as the previous
 record.
 .SH OPTIONS
 .IP
--- libvcflib.orig/src/vcfuniq.cpp
+++ libvcflib/src/vcfuniq.cpp
@@ -22,7 +22,7 @@
 Usage: vcfuniq <vcf file>
 
 List unique genotypes.  Like GNU uniq, but for VCF records.  Remove
-records which have the same positon, ref, and alt as the previous
+records which have the same position, ref, and alt as the previous
 record.
 
 Type: filter
